WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K01C8.2.1 Sequence Name  K01C8.2.1
Length (nt)  1254   Chromosome Location  II: 8267228-8269451
Chromosome . Primary Identifier  II Chromosome Location . Start  8267228
Chromosome Location . End  8269451 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K01C8.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010457 K01C8.2 K01C8.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K01C8.2 K01C8.2 1170   II: 8267302-8267334

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K01C8.2.1 8267228 8269451 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon59692   107   II: 8267228-8267334 Caenorhabditis elegans
Exon59693   290   II: 8267384-8267673 Caenorhabditis elegans
Exon59694   223   II: 8267746-8267968 Caenorhabditis elegans
Exon59695   186   II: 8268015-8268200 Caenorhabditis elegans
Exon59696   277   II: 8268252-8268528 Caenorhabditis elegans
Exon59697   171   II: 8269281-8269451 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K01C8.2.1 8267228 8269451 -1

1 Sequence

Length
1254

1 Sequence Ontology Term

Identifier Name Description
transcript