WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K01C8.3b.1 Sequence Name  K01C8.3b.1
Length (nt)  2192   Chromosome Location  II: 8270607-8273615
Chromosome . Primary Identifier  II Chromosome Location . Start  8270607
Chromosome Location . End  8273615 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K01C8.3b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006562 tdc-1 K01C8.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K01C8.3b K01C8.3b 2118   II: 8270607-8270697

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K01C8.3b.1 8270607 8273615 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon59700   91   II: 8270607-8270697 Caenorhabditis elegans
Exon59702   129   II: 8270778-8270906 Caenorhabditis elegans
Exon59704   323   II: 8270947-8271269 Caenorhabditis elegans
Exon59706   632   II: 8271320-8271951 Caenorhabditis elegans
Exon59708   71   II: 8271997-8272067 Caenorhabditis elegans
Exon59710   221   II: 8272113-8272333 Caenorhabditis elegans
Exon59712   184   II: 8272487-8272670 Caenorhabditis elegans
Exon59713   214   II: 8272718-8272931 Caenorhabditis elegans
Exon59715   120   II: 8273239-8273358 Caenorhabditis elegans
Exon59716   207   II: 8273409-8273615 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K01C8.3b.1 8270607 8273615 1

1 Sequence

Length
2192

1 Sequence Ontology Term

Identifier Name Description
transcript