WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F14F11.1h.1 Sequence Name  F14F11.1h.1
Length (nt)  1998   Chromosome Location  II: 8305745-8321471
Chromosome . Primary Identifier  II Chromosome Location . Start  8305745
Chromosome Location . End  8321471 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F14F11.1h.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008819 shw-1 F14F11.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F14F11.1h F14F11.1h 1860   II: 8305883-8306031

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F14F11.1h.1 8305745 8321471 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon59767   287   II: 8305745-8306031 Caenorhabditis elegans
Exon59768   143   II: 8306175-8306317 Caenorhabditis elegans
Exon59769   128   II: 8306530-8306657 Caenorhabditis elegans
Exon59770   469   II: 8306709-8307177 Caenorhabditis elegans
Exon59771   176   II: 8307270-8307445 Caenorhabditis elegans
Exon59884   120   II: 8309726-8309845 Caenorhabditis elegans
Exon59899   108   II: 8309933-8310040 Caenorhabditis elegans
Exon59914   80   II: 8310175-8310254 Caenorhabditis elegans
Exon59928   205   II: 8310400-8310604 Caenorhabditis elegans
Exon59944   52   II: 8319111-8319162 Caenorhabditis elegans
Exon59948   92   II: 8320206-8320297 Caenorhabditis elegans
Exon59952   138   II: 8321334-8321471 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F14F11.1h.1 8305745 8321471 -1

1 Sequence

Length
1998

1 Sequence Ontology Term

Identifier Name Description
transcript