WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F14F11.1a.8 Sequence Name  F14F11.1a.8
Length (nt)  1662   Chromosome Location  II: 8307842-8310606
Chromosome . Primary Identifier  II Chromosome Location . Start  8307842
Chromosome Location . End  8310606 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F14F11.1a.8

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008819 shw-1 F14F11.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F14F11.1a F14F11.1a 1482   II: 8308014-8308175

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F14F11.1a.8 8307842 8310606 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon59773   334   II: 8307842-8308175 Caenorhabditis elegans
Exon59793   205   II: 8308354-8308558 Caenorhabditis elegans
Exon59807   140   II: 8308657-8308796 Caenorhabditis elegans
Exon59821   104   II: 8308841-8308944 Caenorhabditis elegans
Exon59835   127   II: 8309005-8309131 Caenorhabditis elegans
Exon59849   143   II: 8309179-8309321 Caenorhabditis elegans
Exon59863   94   II: 8309367-8309460 Caenorhabditis elegans
Exon59877   120   II: 8309726-8309845 Caenorhabditis elegans
Exon59892   108   II: 8309933-8310040 Caenorhabditis elegans
Exon59907   80   II: 8310175-8310254 Caenorhabditis elegans
Exon59929   207   II: 8310400-8310606 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F14F11.1a.8 8307842 8310606 -1

1 Sequence

Length
1662

1 Sequence Ontology Term

Identifier Name Description
transcript