WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F14F11.1a.5 Sequence Name  F14F11.1a.5
Length (nt)  1922   Chromosome Location  II: 8307843-8317949
Chromosome . Primary Identifier  II Chromosome Location . Start  8307843
Chromosome Location . End  8317949 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F14F11.1a.5

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008819 shw-1 F14F11.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F14F11.1a F14F11.1a 1482   II: 8308014-8308175

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F14F11.1a.5 8307843 8317949 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon59774   333   II: 8307843-8308175 Caenorhabditis elegans
Exon59790   205   II: 8308354-8308558 Caenorhabditis elegans
Exon59804   140   II: 8308657-8308796 Caenorhabditis elegans
Exon59818   104   II: 8308841-8308944 Caenorhabditis elegans
Exon59832   127   II: 8309005-8309131 Caenorhabditis elegans
Exon59846   143   II: 8309179-8309321 Caenorhabditis elegans
Exon59860   94   II: 8309367-8309460 Caenorhabditis elegans
Exon59874   120   II: 8309726-8309845 Caenorhabditis elegans
Exon59889   108   II: 8309933-8310040 Caenorhabditis elegans
Exon59904   80   II: 8310175-8310254 Caenorhabditis elegans
Exon59919   205   II: 8310400-8310604 Caenorhabditis elegans
Exon59938   263   II: 8317687-8317949 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F14F11.1a.5 8307843 8317949 -1

1 Sequence

Length
1922

1 Sequence Ontology Term

Identifier Name Description
transcript