WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F14F11.1c.1 Sequence Name  F14F11.1c.1
Length (nt)  1633   Chromosome Location  II: 8308014-8320298
Chromosome . Primary Identifier  II Chromosome Location . Start  8308014
Chromosome Location . End  8320298 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F14F11.1c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008819 shw-1 F14F11.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F14F11.1c F14F11.1c 1632   II: 8308014-8308175

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F14F11.1c.1 8308014 8320298 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon59784   162   II: 8308014-8308175 Caenorhabditis elegans
Exon59795   205   II: 8308354-8308558 Caenorhabditis elegans
Exon59809   140   II: 8308657-8308796 Caenorhabditis elegans
Exon59823   104   II: 8308841-8308944 Caenorhabditis elegans
Exon59837   127   II: 8309005-8309131 Caenorhabditis elegans
Exon59851   143   II: 8309179-8309321 Caenorhabditis elegans
Exon59865   94   II: 8309367-8309460 Caenorhabditis elegans
Exon59879   120   II: 8309726-8309845 Caenorhabditis elegans
Exon59894   108   II: 8309933-8310040 Caenorhabditis elegans
Exon59909   80   II: 8310175-8310254 Caenorhabditis elegans
Exon59923   205   II: 8310400-8310604 Caenorhabditis elegans
Exon59943   52   II: 8319111-8319162 Caenorhabditis elegans
Exon59949   93   II: 8320206-8320298 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F14F11.1c.1 8308014 8320298 -1

1 Sequence

Length
1633

1 Sequence Ontology Term

Identifier Name Description
transcript