WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F14F11.1b.1 Sequence Name  F14F11.1b.1
Length (nt)  1770   Chromosome Location  II: 8308014-8321471
Chromosome . Primary Identifier  II Chromosome Location . Start  8308014
Chromosome Location . End  8321471 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F14F11.1b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008819 shw-1 F14F11.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F14F11.1b F14F11.1b 1770   II: 8308014-8308175

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F14F11.1b.1 8308014 8321471 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon59785   162   II: 8308014-8308175 Caenorhabditis elegans
Exon59794   205   II: 8308354-8308558 Caenorhabditis elegans
Exon59808   140   II: 8308657-8308796 Caenorhabditis elegans
Exon59822   104   II: 8308841-8308944 Caenorhabditis elegans
Exon59836   127   II: 8309005-8309131 Caenorhabditis elegans
Exon59850   143   II: 8309179-8309321 Caenorhabditis elegans
Exon59864   94   II: 8309367-8309460 Caenorhabditis elegans
Exon59878   120   II: 8309726-8309845 Caenorhabditis elegans
Exon59893   108   II: 8309933-8310040 Caenorhabditis elegans
Exon59908   80   II: 8310175-8310254 Caenorhabditis elegans
Exon59922   205   II: 8310400-8310604 Caenorhabditis elegans
Exon59942   52   II: 8319111-8319162 Caenorhabditis elegans
Exon59947   92   II: 8320206-8320297 Caenorhabditis elegans
Exon59951   138   II: 8321334-8321471 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F14F11.1b.1 8308014 8321471 -1

1 Sequence

Length
1770

1 Sequence Ontology Term

Identifier Name Description
transcript