WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F14E5.2b.1 Sequence Name  F14E5.2b.1
Length (nt)  3806   Chromosome Location  II: 8423953-8428858
Chromosome . Primary Identifier  II Chromosome Location . Start  8423953
Chromosome Location . End  8428858 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F14E5.2b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008800 F14E5.2 F14E5.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F14E5.2b F14E5.2b 3444   II: 8424295-8424572

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F14E5.2b.1 8423953 8428858 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon60193   620   II: 8423953-8424572 Caenorhabditis elegans
Exon60197   461   II: 8424621-8425081 Caenorhabditis elegans
Exon60199   192   II: 8425144-8425335 Caenorhabditis elegans
Exon60201   230   II: 8425386-8425615 Caenorhabditis elegans
Exon60203   121   II: 8426038-8426158 Caenorhabditis elegans
Exon60205   621   II: 8426210-8426830 Caenorhabditis elegans
Exon60207   701   II: 8426879-8427579 Caenorhabditis elegans
Exon60209   87   II: 8427789-8427875 Caenorhabditis elegans
Exon60211   320   II: 8427926-8428245 Caenorhabditis elegans
Exon60213   295   II: 8428314-8428608 Caenorhabditis elegans
Exon60215   89   II: 8428655-8428743 Caenorhabditis elegans
Exon60217   69   II: 8428790-8428858 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F14E5.2b.1 8423953 8428858 -1

1 Sequence

Length
3806

1 Sequence Ontology Term

Identifier Name Description
transcript