WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F14E5.2a.1 Sequence Name  F14E5.2a.1
Length (nt)  3808   Chromosome Location  II: 8423954-8428855
Chromosome . Primary Identifier  II Chromosome Location . Start  8423954
Chromosome Location . End  8428855 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F14E5.2a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008800 F14E5.2 F14E5.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F14E5.2a F14E5.2a 3450   II: 8424295-8424572

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F14E5.2a.1 8423954 8428855 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon60194   619   II: 8423954-8424572 Caenorhabditis elegans
Exon60196   461   II: 8424621-8425081 Caenorhabditis elegans
Exon60198   192   II: 8425144-8425335 Caenorhabditis elegans
Exon60200   230   II: 8425386-8425615 Caenorhabditis elegans
Exon60202   127   II: 8426032-8426158 Caenorhabditis elegans
Exon60204   621   II: 8426210-8426830 Caenorhabditis elegans
Exon60206   701   II: 8426879-8427579 Caenorhabditis elegans
Exon60208   87   II: 8427789-8427875 Caenorhabditis elegans
Exon60210   320   II: 8427926-8428245 Caenorhabditis elegans
Exon60212   295   II: 8428314-8428608 Caenorhabditis elegans
Exon60214   89   II: 8428655-8428743 Caenorhabditis elegans
Exon60216   66   II: 8428790-8428855 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F14E5.2a.1 8423954 8428855 -1

1 Sequence

Length
3808

1 Sequence Ontology Term

Identifier Name Description
transcript