WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T13H5.1f.2 Sequence Name  T13H5.1f.2
Length (nt)  2752   Chromosome Location  II: 8487586-8501738
Chromosome . Primary Identifier  II Chromosome Location . Start  8487586
Chromosome Location . End  8501738 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T13H5.1f.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011755 T13H5.1 T13H5.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T13H5.1f T13H5.1f 2385   II: 8487947-8488027

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T13H5.1f.2 8487586 8501738 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

17 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon60382   442   II: 8487586-8488027 Caenorhabditis elegans
Exon60394   159   II: 8488126-8488284 Caenorhabditis elegans
Exon60404   136   II: 8488336-8488471 Caenorhabditis elegans
Exon60414   134   II: 8488520-8488653 Caenorhabditis elegans
Exon60425   84   II: 8488801-8488884 Caenorhabditis elegans
Exon60435   120   II: 8490741-8490860 Caenorhabditis elegans
Exon60444   138   II: 8491163-8491300 Caenorhabditis elegans
Exon60453   74   II: 8491369-8491442 Caenorhabditis elegans
Exon60462   100   II: 8491489-8491588 Caenorhabditis elegans
Exon60471   117   II: 8492093-8492209 Caenorhabditis elegans
Exon60480   172   II: 8492459-8492630 Caenorhabditis elegans
Exon60504   281   II: 8495721-8496001 Caenorhabditis elegans
Exon60513   138   II: 8496050-8496187 Caenorhabditis elegans
Exon60522   90   II: 8496889-8496978 Caenorhabditis elegans
Exon60531   78   II: 8497055-8497132 Caenorhabditis elegans
Exon60540   116   II: 8497520-8497635 Caenorhabditis elegans
Exon60546   373   II: 8501366-8501738 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T13H5.1f.2 8487586 8501738 -1

1 Sequence

Length
2752

1 Sequence Ontology Term

Identifier Name Description
transcript