WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T13H5.1b.1 Sequence Name  T13H5.1b.1
Length (nt)  2285   Chromosome Location  II: 8487947-8505527
Chromosome . Primary Identifier  II Chromosome Location . Start  8487947
Chromosome Location . End  8505527 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T13H5.1b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011755 T13H5.1 T13H5.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T13H5.1b T13H5.1b 2262   II: 8487947-8488027

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T13H5.1b.1 8487947 8505527 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

17 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon60384   81   II: 8487947-8488027 Caenorhabditis elegans
Exon60389   159   II: 8488126-8488284 Caenorhabditis elegans
Exon60399   136   II: 8488336-8488471 Caenorhabditis elegans
Exon60409   134   II: 8488520-8488653 Caenorhabditis elegans
Exon60420   84   II: 8488801-8488884 Caenorhabditis elegans
Exon60430   120   II: 8490741-8490860 Caenorhabditis elegans
Exon60439   138   II: 8491163-8491300 Caenorhabditis elegans
Exon60448   74   II: 8491369-8491442 Caenorhabditis elegans
Exon60457   100   II: 8491489-8491588 Caenorhabditis elegans
Exon60466   117   II: 8492093-8492209 Caenorhabditis elegans
Exon60475   172   II: 8492459-8492630 Caenorhabditis elegans
Exon60499   281   II: 8495721-8496001 Caenorhabditis elegans
Exon60508   138   II: 8496050-8496187 Caenorhabditis elegans
Exon60517   90   II: 8496889-8496978 Caenorhabditis elegans
Exon60526   78   II: 8497055-8497132 Caenorhabditis elegans
Exon60535   116   II: 8497520-8497635 Caenorhabditis elegans
Exon60547   267   II: 8505261-8505527 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T13H5.1b.1 8487947 8505527 -1

1 Sequence

Length
2285

1 Sequence Ontology Term

Identifier Name Description
transcript