WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T13H5.1h.1 Sequence Name  T13H5.1h.1
Length (nt)  2091   Chromosome Location  II: 8487947-8506602
Chromosome . Primary Identifier  II Chromosome Location . Start  8487947
Chromosome Location . End  8506602 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T13H5.1h.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011755 T13H5.1 T13H5.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T13H5.1h T13H5.1h 2091   II: 8487947-8488027

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T13H5.1h.1 8487947 8506602 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

18 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon60385   81   II: 8487947-8488027 Caenorhabditis elegans
Exon60396   159   II: 8488126-8488284 Caenorhabditis elegans
Exon60406   136   II: 8488336-8488471 Caenorhabditis elegans
Exon60416   134   II: 8488520-8488653 Caenorhabditis elegans
Exon60427   84   II: 8488801-8488884 Caenorhabditis elegans
Exon60437   120   II: 8490741-8490860 Caenorhabditis elegans
Exon60446   138   II: 8491163-8491300 Caenorhabditis elegans
Exon60455   74   II: 8491369-8491442 Caenorhabditis elegans
Exon60464   100   II: 8491489-8491588 Caenorhabditis elegans
Exon60473   117   II: 8492093-8492209 Caenorhabditis elegans
Exon60482   172   II: 8492459-8492630 Caenorhabditis elegans
Exon60506   281   II: 8495721-8496001 Caenorhabditis elegans
Exon60515   138   II: 8496050-8496187 Caenorhabditis elegans
Exon60524   90   II: 8496889-8496978 Caenorhabditis elegans
Exon60533   78   II: 8497055-8497132 Caenorhabditis elegans
Exon60542   116   II: 8497520-8497635 Caenorhabditis elegans
Exon60552   47   II: 8506486-8506532 Caenorhabditis elegans
Exon60553   26   II: 8506577-8506602 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T13H5.1h.1 8487947 8506602 -1

1 Sequence

Length
2091

1 Sequence Ontology Term

Identifier Name Description
transcript