WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T13H5.1f.1 Sequence Name  T13H5.1f.1
Length (nt)  2520   Chromosome Location  II: 8487947-8507069
Chromosome . Primary Identifier  II Chromosome Location . Start  8487947
Chromosome Location . End  8507069 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T13H5.1f.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011755 T13H5.1 T13H5.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T13H5.1f T13H5.1f 2385   II: 8487947-8488027

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T13H5.1f.1 8487947 8507069 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

20 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon60386   81   II: 8487947-8488027 Caenorhabditis elegans
Exon60393   159   II: 8488126-8488284 Caenorhabditis elegans
Exon60403   136   II: 8488336-8488471 Caenorhabditis elegans
Exon60413   134   II: 8488520-8488653 Caenorhabditis elegans
Exon60424   84   II: 8488801-8488884 Caenorhabditis elegans
Exon60434   120   II: 8490741-8490860 Caenorhabditis elegans
Exon60443   138   II: 8491163-8491300 Caenorhabditis elegans
Exon60452   74   II: 8491369-8491442 Caenorhabditis elegans
Exon60461   100   II: 8491489-8491588 Caenorhabditis elegans
Exon60470   117   II: 8492093-8492209 Caenorhabditis elegans
Exon60479   172   II: 8492459-8492630 Caenorhabditis elegans
Exon60503   281   II: 8495721-8496001 Caenorhabditis elegans
Exon60512   138   II: 8496050-8496187 Caenorhabditis elegans
Exon60521   90   II: 8496889-8496978 Caenorhabditis elegans
Exon60530   78   II: 8497055-8497132 Caenorhabditis elegans
Exon60539   116   II: 8497520-8497635 Caenorhabditis elegans
Exon60545   367   II: 8501366-8501732 Caenorhabditis elegans
Exon60550   47   II: 8506486-8506532 Caenorhabditis elegans
Exon60556   74   II: 8506577-8506650 Caenorhabditis elegans
Exon60558   14   II: 8507056-8507069 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T13H5.1f.1 8487947 8507069 -1

1 Sequence

Length
2520

1 Sequence Ontology Term

Identifier Name Description
transcript