WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T13H5.8.1 Sequence Name  T13H5.8.1
Length (nt)  1916   Chromosome Location  II: 8518510-8520696
Chromosome . Primary Identifier  II Chromosome Location . Start  8518510
Chromosome Location . End  8520696 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T13H5.8.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011761 T13H5.8 T13H5.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T13H5.8 T13H5.8 1701   II: 8518510-8518641

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T13H5.8.1 8518510 8520696 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon60587   132   II: 8518510-8518641 Caenorhabditis elegans
Exon60588   138   II: 8518685-8518822 Caenorhabditis elegans
Exon60589   329   II: 8518871-8519199 Caenorhabditis elegans
Exon60590   387   II: 8519244-8519630 Caenorhabditis elegans
Exon60591   433   II: 8519672-8520104 Caenorhabditis elegans
Exon60592   77   II: 8520154-8520230 Caenorhabditis elegans
Exon60593   420   II: 8520277-8520696 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T13H5.8.1 8518510 8520696 1

1 Sequence

Length
1916

1 Sequence Ontology Term

Identifier Name Description
transcript