WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W01C9.3b.1 Sequence Name  W01C9.3b.1
Length (nt)  2750   Chromosome Location  II: 8540720-8545381
Chromosome . Primary Identifier  II Chromosome Location . Start  8540720
Chromosome Location . End  8545381 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W01C9.3b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004155 pqn-73 W01C9.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W01C9.3b W01C9.3b 2520   II: 8540720-8540783

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:W01C9.3b.1 8540720 8545381 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

16 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon60639   64   II: 8540720-8540783 Caenorhabditis elegans
Exon60641   75   II: 8541609-8541683 Caenorhabditis elegans
Exon60645   80   II: 8541762-8541841 Caenorhabditis elegans
Exon60649   105   II: 8541901-8542005 Caenorhabditis elegans
Exon60652   99   II: 8542077-8542175 Caenorhabditis elegans
Exon60655   242   II: 8542259-8542500 Caenorhabditis elegans
Exon60659   265   II: 8542742-8543006 Caenorhabditis elegans
Exon60663   204   II: 8543051-8543254 Caenorhabditis elegans
Exon60667   82   II: 8543372-8543453 Caenorhabditis elegans
Exon60671   695   II: 8543549-8544243 Caenorhabditis elegans
Exon60675   47   II: 8544291-8544337 Caenorhabditis elegans
Exon60679   99   II: 8544382-8544480 Caenorhabditis elegans
Exon60683   114   II: 8544528-8544641 Caenorhabditis elegans
Exon60687   214   II: 8544694-8544907 Caenorhabditis elegans
Exon60691   110   II: 8544959-8545068 Caenorhabditis elegans
Exon60696   255   II: 8545127-8545381 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:W01C9.3b.1 8540720 8545381 1

1 Sequence

Length
2750

1 Sequence Ontology Term

Identifier Name Description
transcript