WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W01C9.3c.1 Sequence Name  W01C9.3c.1
Length (nt)  2403   Chromosome Location  II: 8541662-8545151
Chromosome . Primary Identifier  II Chromosome Location . Start  8541662
Chromosome Location . End  8545151 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W01C9.3c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004155 pqn-73 W01C9.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W01C9.3c W01C9.3c 2403   II: 8541662-8541683

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:W01C9.3c.1 8541662 8545151 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon60642   22   II: 8541662-8541683 Caenorhabditis elegans
Exon60646   80   II: 8541762-8541841 Caenorhabditis elegans
Exon60650   105   II: 8541901-8542005 Caenorhabditis elegans
Exon60653   99   II: 8542077-8542175 Caenorhabditis elegans
Exon60656   242   II: 8542259-8542500 Caenorhabditis elegans
Exon60660   265   II: 8542742-8543006 Caenorhabditis elegans
Exon60664   204   II: 8543051-8543254 Caenorhabditis elegans
Exon60668   82   II: 8543372-8543453 Caenorhabditis elegans
Exon60672   695   II: 8543549-8544243 Caenorhabditis elegans
Exon60676   47   II: 8544291-8544337 Caenorhabditis elegans
Exon60680   99   II: 8544382-8544480 Caenorhabditis elegans
Exon60684   114   II: 8544528-8544641 Caenorhabditis elegans
Exon60688   214   II: 8544694-8544907 Caenorhabditis elegans
Exon60692   110   II: 8544959-8545068 Caenorhabditis elegans
Exon60694   25   II: 8545127-8545151 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:W01C9.3c.1 8541662 8545151 1

1 Sequence

Length
2403

1 Sequence Ontology Term

Identifier Name Description
transcript