WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F28C6.3 Sequence Name  F28C6.3
Length (nt)  1293   Chromosome Location  II: 8600528-8600727
Chromosome . Primary Identifier  II Chromosome Location . Start  8600528
Chromosome Location . End  8600727
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F28C6.3

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE03274 CPF-1 47.9 430 Caenorhabditis elegans
 

Other

16 RNAi

WormBase ID
WBRNAi00099848
WBRNAi00099242
WBRNAi00008709
WBRNAi00025291
WBRNAi00063789
WBRNAi00071187
WBRNAi00099444
WBRNAi00063790
WBRNAi00063791
WBRNAi00063792
WBRNAi00066451
WBRNAi00066452
WBRNAi00099646
WBRNAi00045816
WBRNAi00081949
WBRNAi00114516

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F28C6.3 8600528 8600727 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000773 cpf-1 F28C6.3 Caenorhabditis elegans

6 Locations


Feature . Primary Identifier
Start End Strand
CDS:F28C6.3 8600528 8600727 -1
CDS:F28C6.3 8600924 8601380 -1
CDS:F28C6.3 8601581 8601703 -1
CDS:F28C6.3 8601755 8602051 -1
CDS:F28C6.3 8602131 8602296 -1
CDS:F28C6.3 8602361 8602410 -1

1 Sequence

Length
1293

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F28C6.3.1 F28C6.3.1 1402   II: 8600449-8602440