WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T22C8.1.1 Sequence Name  T22C8.1.1
Length (nt)  1173   Chromosome Location  II: 8612770-8614426
Chromosome . Primary Identifier  II Chromosome Location . Start  8612770
Chromosome Location . End  8614426 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T22C8.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011922 T22C8.1 T22C8.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T22C8.1 T22C8.1 1173   II: 8612770-8612874

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T22C8.1.1 8612770 8614426 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon60884   105   II: 8612770-8612874 Caenorhabditis elegans
Exon60885   174   II: 8612920-8613093 Caenorhabditis elegans
Exon60886   96   II: 8613186-8613281 Caenorhabditis elegans
Exon60887   300   II: 8613331-8613630 Caenorhabditis elegans
Exon60888   171   II: 8613684-8613854 Caenorhabditis elegans
Exon60889   86   II: 8614003-8614088 Caenorhabditis elegans
Exon60890   140   II: 8614139-8614278 Caenorhabditis elegans
Exon60891   101   II: 8614326-8614426 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T22C8.1.1 8612770 8614426 1

1 Sequence

Length
1173

1 Sequence Ontology Term

Identifier Name Description
transcript