WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T22C8.2.1 Sequence Name  T22C8.2.1
Length (nt)  1625   Chromosome Location  II: 8614546-8617616
Chromosome . Primary Identifier  II Chromosome Location . Start  8614546
Chromosome Location . End  8617616 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T22C8.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011923 chhy-1 T22C8.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T22C8.2 T22C8.2 1377   II: 8614630-8614867

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T22C8.2.1 8614546 8617616 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon60892   322   II: 8614546-8614867 Caenorhabditis elegans
Exon60895   221   II: 8615023-8615243 Caenorhabditis elegans
Exon60898   117   II: 8615294-8615410 Caenorhabditis elegans
Exon60901   100   II: 8615478-8615577 Caenorhabditis elegans
Exon60904   251   II: 8616064-8616314 Caenorhabditis elegans
Exon60907   141   II: 8616440-8616580 Caenorhabditis elegans
Exon60910   116   II: 8616717-8616832 Caenorhabditis elegans
Exon60913   125   II: 8616884-8617008 Caenorhabditis elegans
Exon60916   87   II: 8617158-8617244 Caenorhabditis elegans
Exon60920   145   II: 8617472-8617616 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T22C8.2.1 8614546 8617616 -1

1 Sequence

Length
1625

1 Sequence Ontology Term

Identifier Name Description
transcript