WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:D2085.6 Sequence Name  D2085.6
Length (nt)  1335   Chromosome Location  II: 8659875-8660031
Chromosome . Primary Identifier  II Chromosome Location . Start  8659875
Chromosome Location . End  8660031
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
D2085.6

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE03109 PIGA-1 49.5 444 Caenorhabditis elegans
 

Other

5 RNAi

WormBase ID
WBRNAi00043505
WBRNAi00012599
WBRNAi00030420
WBRNAi00111230
WBRNAi00008101

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:D2085.6 8659875 8660031 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008431 piga-1 D2085.6 Caenorhabditis elegans

7 Locations


Feature . Primary Identifier
Start End Strand
CDS:D2085.6 8659875 8660031 -1
CDS:D2085.6 8660081 8660264 -1
CDS:D2085.6 8660324 8660639 -1
CDS:D2085.6 8660691 8661056 -1
CDS:D2085.6 8661173 8661295 -1
CDS:D2085.6 8661344 8661500 -1
CDS:D2085.6 8661557 8661588 -1

1 Sequence

Length
1335

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:D2085.6.1 D2085.6.1 1552   II: 8659782-8661712