WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:D2085.4.1 Sequence Name  D2085.4.1
Length (nt)  3156   Chromosome Location  II: 8664833-8669154
Chromosome . Primary Identifier  II Chromosome Location . Start  8664833
Chromosome Location . End  8669154 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
D2085.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008429 etc-1 D2085.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:D2085.4 D2085.4 3006   II: 8664893-8665093

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:D2085.4.1 8664833 8669154 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon61014   261   II: 8664833-8665093 Caenorhabditis elegans
Exon61015   218   II: 8665154-8665371 Caenorhabditis elegans
Exon61016   187   II: 8665425-8665611 Caenorhabditis elegans
Exon61017   134   II: 8665662-8665795 Caenorhabditis elegans
Exon61018   341   II: 8665842-8666182 Caenorhabditis elegans
Exon61019   100   II: 8666233-8666332 Caenorhabditis elegans
Exon61020   289   II: 8666379-8666667 Caenorhabditis elegans
Exon61021   182   II: 8666721-8666902 Caenorhabditis elegans
Exon61022   323   II: 8666958-8667280 Caenorhabditis elegans
Exon61023   266   II: 8667464-8667729 Caenorhabditis elegans
Exon61024   204   II: 8667780-8667983 Caenorhabditis elegans
Exon61025   99   II: 8668054-8668152 Caenorhabditis elegans
Exon61026   248   II: 8668509-8668756 Caenorhabditis elegans
Exon61027   73   II: 8668805-8668877 Caenorhabditis elegans
Exon61028   231   II: 8668924-8669154 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:D2085.4.1 8664833 8669154 1

1 Sequence

Length
3156

1 Sequence Ontology Term

Identifier Name Description
transcript