WormMine: MRNA Transcript:D2085.5b.3

• WormMine ID: Transcript:D2085.5b.3
• Sequence Name: D2085.5b.3
• Length (nt): 5295
• Chromosome Location: II: 8669136-8683295
• Chromosome . Primary Identifier: II
• Chromosome Location . Start: 8669136
• Chromosome Location . End: 8683295
• Method: Coding_transcript

1 Organism

• Name: Caenorhabditis elegans
• Taxon Id: 6239

1 Synonyms

• Value: D2085.5b.3

Genomics

1 Gene

WormBase Gene ID	Gene Name	Sequence Name	Organism
WBGene00008430	hgap-2	D2085.5	Caenorhabditis elegans

Other

1 CDSs

WormMine ID	Sequence Name	Length (nt)	Chromosome Location
CDS:D2085.5b	D2085.5b	3024	II: 8669353-8669461

1 Chromosome

• WormBase ID: II
• Organism: Caenorhabditis elegans
• Length (nt): 15279421

1 Chromosome Location

• Feature . Primary Identifier: Transcript:D2085.5b.3
• Start: 8669136
• End: 8683295
• Strand: -1

3 Data Sets

• WormBaseAcedbConverter
• C. elegans genomic annotations (GFF3 Gene)
• WormBase C. elegans transcript sequence (Fasta)

22 Exons

WormBase ID	Name	Sequence Name	Length (nt)	Chromosome Location	Organism
Exon61035			326	II: 8669136-8669461	Caenorhabditis elegans
Exon61055			117	II: 8669511-8669627	Caenorhabditis elegans
Exon61078			166	II: 8669683-8669848	Caenorhabditis elegans
Exon61101			429	II: 8670176-8670604	Caenorhabditis elegans
Exon61124			248	II: 8670660-8670907	Caenorhabditis elegans
Exon61147			270	II: 8671360-8671629	Caenorhabditis elegans
Exon61170			82	II: 8671676-8671757	Caenorhabditis elegans
Exon61207			418	II: 8672707-8673124	Caenorhabditis elegans
Exon61230			123	II: 8673173-8673295	Caenorhabditis elegans
Exon61253			104	II: 8673617-8673720	Caenorhabditis elegans
Exon61276			399	II: 8673773-8674171	Caenorhabditis elegans
Exon61299			477	II: 8674225-8674701	Caenorhabditis elegans
Exon61322			138	II: 8674868-8675005	Caenorhabditis elegans
Exon61358			174	II: 8680279-8680452	Caenorhabditis elegans
Exon61365			132	II: 8680515-8680646	Caenorhabditis elegans
Exon61373			433	II: 8680690-8681122	Caenorhabditis elegans
Exon61380			248	II: 8681420-8681667	Caenorhabditis elegans
Exon61388			159	II: 8681726-8681884	Caenorhabditis elegans
Exon61396			97	II: 8682029-8682125	Caenorhabditis elegans
Exon61404			488	II: 8682175-8682662	Caenorhabditis elegans
Exon61412			179	II: 8682978-8683156	Caenorhabditis elegans
Exon61423			88	II: 8683208-8683295	Caenorhabditis elegans

1 Locations

• Feature . Primary Identifier: Transcript:D2085.5b.3
• Start: 8669136
• End: 8683295
• Strand: -1

1 Sequence

• Length: 5295

1 Sequence Ontology Term

• Name: transcript