WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:D2085.5b.2 Sequence Name  D2085.5b.2
Length (nt)  5491   Chromosome Location  II: 8669136-8684918
Chromosome . Primary Identifier  II Chromosome Location . Start  8669136
Chromosome Location . End  8684918 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
D2085.5b.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008430 hgap-2 D2085.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:D2085.5b D2085.5b 3024   II: 8669353-8669461

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:D2085.5b.2 8669136 8684918 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

24 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon61037   326   II: 8669136-8669461 Caenorhabditis elegans
Exon61054   117   II: 8669511-8669627 Caenorhabditis elegans
Exon61077   166   II: 8669683-8669848 Caenorhabditis elegans
Exon61100   429   II: 8670176-8670604 Caenorhabditis elegans
Exon61123   248   II: 8670660-8670907 Caenorhabditis elegans
Exon61146   270   II: 8671360-8671629 Caenorhabditis elegans
Exon61169   82   II: 8671676-8671757 Caenorhabditis elegans
Exon61206   418   II: 8672707-8673124 Caenorhabditis elegans
Exon61229   123   II: 8673173-8673295 Caenorhabditis elegans
Exon61252   104   II: 8673617-8673720 Caenorhabditis elegans
Exon61275   399   II: 8673773-8674171 Caenorhabditis elegans
Exon61298   477   II: 8674225-8674701 Caenorhabditis elegans
Exon61321   138   II: 8674868-8675005 Caenorhabditis elegans
Exon61357   174   II: 8680279-8680452 Caenorhabditis elegans
Exon61364   132   II: 8680515-8680646 Caenorhabditis elegans
Exon61372   433   II: 8680690-8681122 Caenorhabditis elegans
Exon61379   248   II: 8681420-8681667 Caenorhabditis elegans
Exon61387   159   II: 8681726-8681884 Caenorhabditis elegans
Exon61395   97   II: 8682029-8682125 Caenorhabditis elegans
Exon61403   488   II: 8682175-8682662 Caenorhabditis elegans
Exon61411   179   II: 8682978-8683156 Caenorhabditis elegans
Exon61420   86   II: 8683208-8683293 Caenorhabditis elegans
Exon61427   126   II: 8684275-8684400 Caenorhabditis elegans
Exon61431   72   II: 8684847-8684918 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:D2085.5b.2 8669136 8684918 -1

1 Sequence

Length
5491

1 Sequence Ontology Term

Identifier Name Description
transcript