WormMine: MRNA Transcript:D2085.5l.1

• WormMine ID: Transcript:D2085.5l.1
• Sequence Name: D2085.5l.1
• Length (nt): 5229
• Chromosome Location: II: 8669353-8684427
• Chromosome . Primary Identifier: II
• Chromosome Location . Start: 8669353
• Chromosome Location . End: 8684427
• Method: Coding_transcript

1 Organism

• Name: Caenorhabditis elegans
• Taxon Id: 6239

1 Synonyms

• Value: D2085.5l.1

Genomics

1 Gene

WormBase Gene ID	Gene Name	Sequence Name	Organism
WBGene00008430	hgap-2	D2085.5	Caenorhabditis elegans

Other

1 CDSs

WormMine ID	Sequence Name	Length (nt)	Chromosome Location
CDS:D2085.5l	D2085.5l	5229	II: 8669353-8669461

1 Chromosome

• WormBase ID: II
• Organism: Caenorhabditis elegans
• Length (nt): 15279421

1 Chromosome Location

• Feature . Primary Identifier: Transcript:D2085.5l.1
• Start: 8669353
• End: 8684427
• Strand: -1

3 Data Sets

• WormBaseAcedbConverter
• C. elegans genomic annotations (GFF3 Gene)
• WormBase C. elegans transcript sequence (Fasta)

23 Exons

WormBase ID	Name	Sequence Name	Length (nt)	Chromosome Location	Organism
Exon61050			109	II: 8669353-8669461	Caenorhabditis elegans
Exon61073			117	II: 8669511-8669627	Caenorhabditis elegans
Exon61096			166	II: 8669683-8669848	Caenorhabditis elegans
Exon61119			429	II: 8670176-8670604	Caenorhabditis elegans
Exon61142			248	II: 8670660-8670907	Caenorhabditis elegans
Exon61165			270	II: 8671360-8671629	Caenorhabditis elegans
Exon61188			82	II: 8671676-8671757	Caenorhabditis elegans
Exon61225			418	II: 8672707-8673124	Caenorhabditis elegans
Exon61248			123	II: 8673173-8673295	Caenorhabditis elegans
Exon61271			104	II: 8673617-8673720	Caenorhabditis elegans
Exon61294			399	II: 8673773-8674171	Caenorhabditis elegans
Exon61317			477	II: 8674225-8674701	Caenorhabditis elegans
Exon61339			138	II: 8674868-8675005	Caenorhabditis elegans
Exon61362			174	II: 8680279-8680452	Caenorhabditis elegans
Exon61368			132	II: 8680515-8680646	Caenorhabditis elegans
Exon61376			433	II: 8680690-8681122	Caenorhabditis elegans
Exon61384			248	II: 8681420-8681667	Caenorhabditis elegans
Exon61392			159	II: 8681726-8681884	Caenorhabditis elegans
Exon61400			97	II: 8682029-8682125	Caenorhabditis elegans
Exon61408			488	II: 8682175-8682662	Caenorhabditis elegans
Exon61416			179	II: 8682978-8683156	Caenorhabditis elegans
Exon61422			86	II: 8683208-8683293	Caenorhabditis elegans
Exon61429			153	II: 8684275-8684427	Caenorhabditis elegans

1 Locations

• Feature . Primary Identifier: Transcript:D2085.5l.1
• Start: 8669353
• End: 8684427
• Strand: -1

1 Sequence

• Length: 5229

1 Sequence Ontology Term

• Name: transcript