WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C34C6.7b.1 Sequence Name  C34C6.7b.1
Length (nt)  981   Chromosome Location  II: 8707651-8708809
Chromosome . Primary Identifier  II Chromosome Location . Start  8707651
Chromosome Location . End  8708809 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C34C6.7b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007919 cup-16 C34C6.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C34C6.7b C34C6.7b 981   II: 8707651-8707858

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C34C6.7b.1 8707651 8708809 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon61509   208   II: 8707651-8707858 Caenorhabditis elegans
Exon61511   533   II: 8707946-8708478 Caenorhabditis elegans
Exon61513   156   II: 8708528-8708683 Caenorhabditis elegans
Exon61515   84   II: 8708726-8708809 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C34C6.7b.1 8707651 8708809 1

1 Sequence

Length
981

1 Sequence Ontology Term

Identifier Name Description
transcript