WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T01B7.5a.1 Sequence Name  T01B7.5a.1
Length (nt)  1413   Chromosome Location  II: 8716834-8721685
Chromosome . Primary Identifier  II Chromosome Location . Start  8716834
Chromosome Location . End  8721685 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T01B7.5a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011311 T01B7.5 T01B7.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T01B7.5a T01B7.5a 1224   II: 8716845-8716867

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T01B7.5a.1 8716834 8721685 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon61536   34   II: 8716834-8716867 Caenorhabditis elegans
Exon61537   206   II: 8716920-8717125 Caenorhabditis elegans
Exon61543   224   II: 8717170-8717393 Caenorhabditis elegans
Exon61548   87   II: 8717437-8717523 Caenorhabditis elegans
Exon61554   107   II: 8718389-8718495 Caenorhabditis elegans
Exon61560   121   II: 8718543-8718663 Caenorhabditis elegans
Exon61566   159   II: 8718709-8718867 Caenorhabditis elegans
Exon61574   153   II: 8719034-8719186 Caenorhabditis elegans
Exon61582   149   II: 8719933-8720081 Caenorhabditis elegans
Exon61593   173   II: 8721513-8721685 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T01B7.5a.1 8716834 8721685 1

1 Sequence

Length
1413

1 Sequence Ontology Term

Identifier Name Description
transcript