WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T01B7.5b.5 Sequence Name  T01B7.5b.5
Length (nt)  2298   Chromosome Location  II: 8718382-8721683
Chromosome . Primary Identifier  II Chromosome Location . Start  8718382
Chromosome Location . End  8721683 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T01B7.5b.5

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011311 T01B7.5 T01B7.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T01B7.5b T01B7.5b 570   II: 8718550-8718663

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T01B7.5b.5 8718382 8721683 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon61552   114   II: 8718382-8718495 Caenorhabditis elegans
Exon61564   121   II: 8718543-8718663 Caenorhabditis elegans
Exon61572   159   II: 8718709-8718867 Caenorhabditis elegans
Exon61580   153   II: 8719034-8719186 Caenorhabditis elegans
Exon61589   1751   II: 8719933-8721683 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T01B7.5b.5 8718382 8721683 1

1 Sequence

Length
2298

1 Sequence Ontology Term

Identifier Name Description
transcript