WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K08F8.1b.1 Sequence Name  K08F8.1b.1
Length (nt)  1679   Chromosome Location  II: 8744071-8747250
Chromosome . Primary Identifier  II Chromosome Location . Start  8744071
Chromosome Location . End  8747250 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K08F8.1b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010681 mak-1 K08F8.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K08F8.1b K08F8.1b 1011   II: 8744129-8744213

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K08F8.1b.1 8744071 8747250 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon61614   143   II: 8744071-8744213 Caenorhabditis elegans
Exon61618   137   II: 8744478-8744614 Caenorhabditis elegans
Exon61621   502   II: 8745249-8745750 Caenorhabditis elegans
Exon61626   205   II: 8745802-8746006 Caenorhabditis elegans
Exon61631   78   II: 8746057-8746134 Caenorhabditis elegans
Exon61640   215   II: 8746588-8746802 Caenorhabditis elegans
Exon61645   399   II: 8746852-8747250 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K08F8.1b.1 8744071 8747250 1

1 Sequence

Length
1679

1 Sequence Ontology Term

Identifier Name Description
transcript