WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F07H5.8.1 Sequence Name  F07H5.8.1
Length (nt)  2691   Chromosome Location  II: 8801130-8804889
Chromosome . Primary Identifier  II Chromosome Location . Start  8801130
Chromosome Location . End  8804889 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F07H5.8.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008559 appg-2 F07H5.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F07H5.8 F07H5.8 2508   II: 8801202-8801264

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F07H5.8.1 8801130 8804889 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon61782   135   II: 8801130-8801264 Caenorhabditis elegans
Exon61783   147   II: 8801968-8802114 Caenorhabditis elegans
Exon61784   171   II: 8802161-8802331 Caenorhabditis elegans
Exon61785   183   II: 8802380-8802562 Caenorhabditis elegans
Exon61786   1224   II: 8802610-8803833 Caenorhabditis elegans
Exon61787   306   II: 8803944-8804249 Caenorhabditis elegans
Exon61788   126   II: 8804293-8804418 Caenorhabditis elegans
Exon61789   399   II: 8804491-8804889 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F07H5.8.1 8801130 8804889 1

1 Sequence

Length
2691

1 Sequence Ontology Term

Identifier Name Description
transcript