WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F46C5.6.1 Sequence Name  F46C5.6.1
Length (nt)  2937   Chromosome Location  II: 8840200-8844515
Chromosome . Primary Identifier  II Chromosome Location . Start  8840200
Chromosome Location . End  8844515 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F46C5.6.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009781 F46C5.6 F46C5.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F46C5.6 F46C5.6 2838   II: 8840270-8840846

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F46C5.6.1 8840200 8844515 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

16 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon61872   647   II: 8840200-8840846 Caenorhabditis elegans
Exon61873   209   II: 8840896-8841104 Caenorhabditis elegans
Exon61874   296   II: 8841157-8841452 Caenorhabditis elegans
Exon61875   106   II: 8841573-8841678 Caenorhabditis elegans
Exon61876   183   II: 8841853-8842035 Caenorhabditis elegans
Exon61877   191   II: 8842080-8842270 Caenorhabditis elegans
Exon61878   333   II: 8842374-8842706 Caenorhabditis elegans
Exon61879   125   II: 8842756-8842880 Caenorhabditis elegans
Exon61880   108   II: 8842930-8843037 Caenorhabditis elegans
Exon61881   107   II: 8843162-8843268 Caenorhabditis elegans
Exon61882   74   II: 8843310-8843383 Caenorhabditis elegans
Exon61883   66   II: 8843563-8843628 Caenorhabditis elegans
Exon61884   62   II: 8843705-8843766 Caenorhabditis elegans
Exon61885   207   II: 8843813-8844019 Caenorhabditis elegans
Exon61886   146   II: 8844103-8844248 Caenorhabditis elegans
Exon61887   77   II: 8844439-8844515 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F46C5.6.1 8840200 8844515 -1

1 Sequence

Length
2937

1 Sequence Ontology Term

Identifier Name Description
transcript