WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T07D4.2b.1 Sequence Name  T07D4.2b.1
Length (nt)  1530   Chromosome Location  II: 8869549-8873942
Chromosome . Primary Identifier  II Chromosome Location . Start  8869549
Chromosome Location . End  8873942 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T07D4.2b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011579 T07D4.2 T07D4.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T07D4.2b T07D4.2b 1191   II: 8869886-8869987

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T07D4.2b.1 8869549 8873942 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon61930   439   II: 8869549-8869987 Caenorhabditis elegans
Exon61932   185   II: 8870120-8870304 Caenorhabditis elegans
Exon61935   116   II: 8870350-8870465 Caenorhabditis elegans
Exon61938   77   II: 8870670-8870746 Caenorhabditis elegans
Exon61941   89   II: 8870790-8870878 Caenorhabditis elegans
Exon61944   337   II: 8870934-8871270 Caenorhabditis elegans
Exon61947   125   II: 8872947-8873071 Caenorhabditis elegans
Exon61949   91   II: 8873308-8873398 Caenorhabditis elegans
Exon61951   28   II: 8873806-8873833 Caenorhabditis elegans
Exon61952   43   II: 8873900-8873942 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T07D4.2b.1 8869549 8873942 -1

1 Sequence

Length
1530

1 Sequence Ontology Term

Identifier Name Description
transcript