WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:T07D4.3b Sequence Name  T07D4.3b
Length (nt)  3786   Chromosome Location  II: 8878619-8878782
Chromosome . Primary Identifier  II Chromosome Location . Start  8878619
Chromosome Location . End  8878782
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T07D4.3b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE52964 RHA-1, isoform b 139.8 1261 Caenorhabditis elegans
 

Other

10 RNAi

WormBase ID
WBRNAi00082643
WBRNAi00002222
WBRNAi00052759
WBRNAi00077916
WBRNAi00007668
WBRNAi00018368
WBRNAi00069461
WBRNAi00083734
WBRNAi00083634
WBRNAi00075510

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:T07D4.3b 8878619 8878782 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004355 rha-1 T07D4.3 Caenorhabditis elegans

15 Locations


Feature . Primary Identifier
Start End Strand
CDS:T07D4.3b 8878619 8878782 -1
CDS:T07D4.3b 8879399 8879431 -1
CDS:T07D4.3b 8879481 8879544 -1
CDS:T07D4.3b 8879591 8879807 -1
CDS:T07D4.3b 8879858 8880265 -1
CDS:T07D4.3b 8880324 8880998 -1
CDS:T07D4.3b 8881044 8881212 -1
CDS:T07D4.3b 8881258 8881602 -1
CDS:T07D4.3b 8881652 8881826 -1
CDS:T07D4.3b 8881873 8882361 -1
CDS:T07D4.3b 8882410 8882670 -1
CDS:T07D4.3b 8882723 8882859 -1
CDS:T07D4.3b 8882911 8882957 -1
CDS:T07D4.3b 8883015 8883445 -1
CDS:T07D4.3b 8883489 8883659 -1

1 Sequence

Length
3786

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T07D4.3b.1 T07D4.3b.1 3909   II: 8878496-8883659