WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:T07D4.4a Sequence Name  T07D4.4a
Length (nt)  3069   Chromosome Location  II: 8884908-8884973
Chromosome . Primary Identifier  II Chromosome Location . Start  8884908
Chromosome Location . End  8884973
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T07D4.4a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE18219 DDX-19, isoform a 108.3 1022 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00052760
WBRNAi00018369
WBRNAi00075465

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:T07D4.4a 8884908 8884973 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011580 ddx-19 T07D4.4 Caenorhabditis elegans

14 Locations


Feature . Primary Identifier
Start End Strand
CDS:T07D4.4a 8884908 8884973 1
CDS:T07D4.4a 8885180 8885231 1
CDS:T07D4.4a 8885278 8885388 1
CDS:T07D4.4a 8885468 8886694 1
CDS:T07D4.4a 8887037 8887094 1
CDS:T07D4.4a 8887144 8887202 1
CDS:T07D4.4a 8887254 8887360 1
CDS:T07D4.4a 8887406 8887692 1
CDS:T07D4.4a 8887846 8888122 1
CDS:T07D4.4a 8888173 8888297 1
CDS:T07D4.4a 8888347 8888457 1
CDS:T07D4.4a 8888621 8888699 1
CDS:T07D4.4a 8888753 8889197 1
CDS:T07D4.4a 8889242 8889306 1

1 Sequence

Length
3069

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T07D4.4a.1 T07D4.4a.1 3472   II: 8884899-8889700