WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T07D4.4d.1 Sequence Name  T07D4.4d.1
Length (nt)  1824   Chromosome Location  II: 8885207-8889306
Chromosome . Primary Identifier  II Chromosome Location . Start  8885207
Chromosome Location . End  8889306 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T07D4.4d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011580 ddx-19 T07D4.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T07D4.4d T07D4.4d 1824   II: 8885207-8885231

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T07D4.4d.1 8885207 8889306 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon61994   25   II: 8885207-8885231 Caenorhabditis elegans
Exon61998   111   II: 8885278-8885388 Caenorhabditis elegans
Exon62000   75   II: 8885468-8885542 Caenorhabditis elegans
Exon62005   58   II: 8887037-8887094 Caenorhabditis elegans
Exon62009   59   II: 8887144-8887202 Caenorhabditis elegans
Exon62013   107   II: 8887254-8887360 Caenorhabditis elegans
Exon62018   287   II: 8887406-8887692 Caenorhabditis elegans
Exon62023   277   II: 8887846-8888122 Caenorhabditis elegans
Exon62028   125   II: 8888173-8888297 Caenorhabditis elegans
Exon62033   111   II: 8888347-8888457 Caenorhabditis elegans
Exon62038   79   II: 8888621-8888699 Caenorhabditis elegans
Exon62043   445   II: 8888753-8889197 Caenorhabditis elegans
Exon62045   65   II: 8889242-8889306 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T07D4.4d.1 8885207 8889306 1

1 Sequence

Length
1824

1 Sequence Ontology Term

Identifier Name Description
transcript