WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:T07D4.4e Sequence Name  T07D4.4e
Length (nt)  1494   Chromosome Location  II: 8887256-8887360
Chromosome . Primary Identifier  II Chromosome Location . Start  8887256
Chromosome Location . End  8887360
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T07D4.4e

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE43315 DDX-19, isoform e 55.8 497 Caenorhabditis elegans
 

Other

2 RNAi

WormBase ID
WBRNAi00052760
WBRNAi00075465

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:T07D4.4e 8887256 8887360 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011580 ddx-19 T07D4.4 Caenorhabditis elegans

8 Locations


Feature . Primary Identifier
Start End Strand
CDS:T07D4.4e 8887256 8887360 1
CDS:T07D4.4e 8887406 8887692 1
CDS:T07D4.4e 8887846 8888122 1
CDS:T07D4.4e 8888173 8888297 1
CDS:T07D4.4e 8888347 8888457 1
CDS:T07D4.4e 8888621 8888699 1
CDS:T07D4.4e 8888753 8889197 1
CDS:T07D4.4e 8889242 8889306 1

1 Sequence

Length
1494

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T07D4.4e.1 T07D4.4e.1 1861   II: 8887256-8889673