WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C18E9.3f.1 Sequence Name  C18E9.3f.1
Length (nt)  1985   Chromosome Location  II: 8966921-8969325
Chromosome . Primary Identifier  II Chromosome Location . Start  8966921
Chromosome Location . End  8969325 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C18E9.3f.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004105 szy-20 C18E9.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C18E9.3f C18E9.3f 1677   II: 8967197-8967338

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C18E9.3f.1 8966921 8969325 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon62214   418   II: 8966921-8967338 Caenorhabditis elegans
Exon62221   614   II: 8967393-8968006 Caenorhabditis elegans
Exon62223   303   II: 8968127-8968429 Caenorhabditis elegans
Exon62231   448   II: 8968516-8968963 Caenorhabditis elegans
Exon62237   86   II: 8969020-8969105 Caenorhabditis elegans
Exon62242   68   II: 8969159-8969226 Caenorhabditis elegans
Exon62247   48   II: 8969278-8969325 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C18E9.3f.1 8966921 8969325 -1

1 Sequence

Length
1985

1 Sequence Ontology Term

Identifier Name Description
transcript