WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F44G4.4a Sequence Name  F44G4.4a
Length (nt)  1236   Chromosome Location  II: 8997834-8997929
Chromosome . Primary Identifier  II Chromosome Location . Start  8997834
Chromosome Location . End  8997929
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F44G4.4a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE02231 TDP-1, isoform a 45.5 411 Caenorhabditis elegans
 

Other

5 RNAi

WormBase ID
WBRNAi00047340
WBRNAi00014968
WBRNAi00032268
WBRNAi00062253
WBRNAi00092583

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F44G4.4a 8997834 8997929 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006514 tdp-1 F44G4.4 Caenorhabditis elegans

7 Locations


Feature . Primary Identifier
Start End Strand
CDS:F44G4.4a 8997834 8997929 1
CDS:F44G4.4a 8997984 8998177 1
CDS:F44G4.4a 8998228 8998307 1
CDS:F44G4.4a 8998421 8998659 1
CDS:F44G4.4a 8998749 8998889 1
CDS:F44G4.4a 8998942 8999150 1
CDS:F44G4.4a 8999255 8999531 1

1 Sequence

Length
1236

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F44G4.4a.1 F44G4.4a.1 1437   II: 8997827-8999725