WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C16D2.2.1 Sequence Name  C16D2.2.1
Length (nt)  322   Chromosome Location  II: 9136178-9137560
Chromosome . Primary Identifier  II Chromosome Location . Start  9136178
Chromosome Location . End  9137560 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C16D2.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00195143 nlp-78 C16D2.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C16D2.2 C16D2.2 210   II: 9136202-9136288

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C16D2.2.1 9136178 9137560 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon62771   111   II: 9136178-9136288 Caenorhabditis elegans
Exon62773   86   II: 9137303-9137388 Caenorhabditis elegans
Exon62774   125   II: 9137436-9137560 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C16D2.2.1 9136178 9137560 1

1 Sequence

Length
322

1 Sequence Ontology Term

Identifier Name Description
transcript