WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W07A12.4c.1 Sequence Name  W07A12.4c.1
Length (nt)  1347   Chromosome Location  II: 9146638-9152311
Chromosome . Primary Identifier  II Chromosome Location . Start  9146638
Chromosome Location . End  9152311 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W07A12.4c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012322 W07A12.4 W07A12.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W07A12.4c W07A12.4c 1347   II: 9146638-9146698

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:W07A12.4c.1 9146638 9152311 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon62834   61   II: 9146638-9146698 Caenorhabditis elegans
Exon62839   103   II: 9148712-9148814 Caenorhabditis elegans
Exon62843   235   II: 9148864-9149098 Caenorhabditis elegans
Exon62847   238   II: 9149150-9149387 Caenorhabditis elegans
Exon62851   253   II: 9149479-9149731 Caenorhabditis elegans
Exon62855   115   II: 9149780-9149894 Caenorhabditis elegans
Exon62859   61   II: 9149947-9150007 Caenorhabditis elegans
Exon62864   76   II: 9150055-9150130 Caenorhabditis elegans
Exon62868   84   II: 9150177-9150260 Caenorhabditis elegans
Exon62871   121   II: 9152191-9152311 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:W07A12.4c.1 9146638 9152311 1

1 Sequence

Length
1347

1 Sequence Ontology Term

Identifier Name Description
transcript