WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W07A12.4a.1 Sequence Name  W07A12.4a.1
Length (nt)  1555   Chromosome Location  II: 9148394-9152469
Chromosome . Primary Identifier  II Chromosome Location . Start  9148394
Chromosome Location . End  9152469 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W07A12.4a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012322 W07A12.4 W07A12.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W07A12.4a W07A12.4a 1347   II: 9148444-9148504

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:W07A12.4a.1 9148394 9152469 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon62836   111   II: 9148394-9148504 Caenorhabditis elegans
Exon62837   103   II: 9148712-9148814 Caenorhabditis elegans
Exon62841   235   II: 9148864-9149098 Caenorhabditis elegans
Exon62845   238   II: 9149150-9149387 Caenorhabditis elegans
Exon62849   253   II: 9149479-9149731 Caenorhabditis elegans
Exon62853   115   II: 9149780-9149894 Caenorhabditis elegans
Exon62857   61   II: 9149947-9150007 Caenorhabditis elegans
Exon62862   76   II: 9150055-9150130 Caenorhabditis elegans
Exon62866   84   II: 9150177-9150260 Caenorhabditis elegans
Exon62873   279   II: 9152191-9152469 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:W07A12.4a.1 9148394 9152469 1

1 Sequence

Length
1555

1 Sequence Ontology Term

Identifier Name Description
transcript