WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK1067.1d.1 Sequence Name  ZK1067.1d.1
Length (nt)  4287   Chromosome Location  II: 9197512-9207211
Chromosome . Primary Identifier  II Chromosome Location . Start  9197512
Chromosome Location . End  9207211 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK1067.1d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002299 let-23 ZK1067.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK1067.1d ZK1067.1d 4008   II: 9197518-9197647

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZK1067.1d.1 9197512 9207211 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

19 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon62985   136   II: 9197512-9197647 Caenorhabditis elegans
Exon62987   21   II: 9197984-9198004 Caenorhabditis elegans
Exon62991   68   II: 9198941-9199008 Caenorhabditis elegans
Exon62994   159   II: 9199189-9199347 Caenorhabditis elegans
Exon62999   154   II: 9199433-9199586 Caenorhabditis elegans
Exon63003   219   II: 9199637-9199855 Caenorhabditis elegans
Exon63007   267   II: 9200018-9200284 Caenorhabditis elegans
Exon63011   117   II: 9200352-9200468 Caenorhabditis elegans
Exon63016   91   II: 9200556-9200646 Caenorhabditis elegans
Exon63020   350   II: 9201054-9201403 Caenorhabditis elegans
Exon63024   130   II: 9201462-9201591 Caenorhabditis elegans
Exon63028   222   II: 9201639-9201860 Caenorhabditis elegans
Exon63032   181   II: 9203988-9204168 Caenorhabditis elegans
Exon63036   282   II: 9204212-9204493 Caenorhabditis elegans
Exon63040   156   II: 9204552-9204707 Caenorhabditis elegans
Exon63044   1104   II: 9205054-9206157 Caenorhabditis elegans
Exon63048   79   II: 9206211-9206289 Caenorhabditis elegans
Exon63052   108   II: 9206343-9206450 Caenorhabditis elegans
Exon63054   443   II: 9206769-9207211 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZK1067.1d.1 9197512 9207211 1

1 Sequence

Length
4287

1 Sequence Ontology Term

Identifier Name Description
transcript