WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK1067.1a.1 Sequence Name  ZK1067.1a.1
Length (nt)  4336   Chromosome Location  II: 9198257-9207213
Chromosome . Primary Identifier  II Chromosome Location . Start  9198257
Chromosome Location . End  9207213 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK1067.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002299 let-23 ZK1067.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK1067.1a ZK1067.1a 3972   II: 9198346-9198460

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZK1067.1a.1 9198257 9207213 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

18 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon62988   204   II: 9198257-9198460 Caenorhabditis elegans
Exon62989   68   II: 9198941-9199008 Caenorhabditis elegans
Exon62992   159   II: 9199189-9199347 Caenorhabditis elegans
Exon62996   154   II: 9199433-9199586 Caenorhabditis elegans
Exon63000   219   II: 9199637-9199855 Caenorhabditis elegans
Exon63004   267   II: 9200018-9200284 Caenorhabditis elegans
Exon63008   117   II: 9200352-9200468 Caenorhabditis elegans
Exon63013   91   II: 9200556-9200646 Caenorhabditis elegans
Exon63017   350   II: 9201054-9201403 Caenorhabditis elegans
Exon63021   130   II: 9201462-9201591 Caenorhabditis elegans
Exon63025   222   II: 9201639-9201860 Caenorhabditis elegans
Exon63029   181   II: 9203988-9204168 Caenorhabditis elegans
Exon63033   282   II: 9204212-9204493 Caenorhabditis elegans
Exon63037   156   II: 9204552-9204707 Caenorhabditis elegans
Exon63041   1104   II: 9205054-9206157 Caenorhabditis elegans
Exon63045   79   II: 9206211-9206289 Caenorhabditis elegans
Exon63049   108   II: 9206343-9206450 Caenorhabditis elegans
Exon63055   445   II: 9206769-9207213 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZK1067.1a.1 9198257 9207213 1

1 Sequence

Length
4336

1 Sequence Ontology Term

Identifier Name Description
transcript