WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C01G6.5.1 Sequence Name  C01G6.5.1
Length (nt)  3678   Chromosome Location  II: 9275024-9280098
Chromosome . Primary Identifier  II Chromosome Location . Start  9275024
Chromosome Location . End  9280098 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C01G6.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007227 gldi-3 C01G6.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C01G6.5 C01G6.5 2859   II: 9275785-9275985

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C01G6.5.1 9275024 9280098 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon63230   962   II: 9275024-9275985 Caenorhabditis elegans
Exon63231   123   II: 9276029-9276151 Caenorhabditis elegans
Exon63232   1881   II: 9276205-9278085 Caenorhabditis elegans
Exon63234   71   II: 9278135-9278205 Caenorhabditis elegans
Exon63235   280   II: 9278257-9278536 Caenorhabditis elegans
Exon63236   121   II: 9278585-9278705 Caenorhabditis elegans
Exon63237   81   II: 9279808-9279888 Caenorhabditis elegans
Exon63238   159   II: 9279940-9280098 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C01G6.5.1 9275024 9280098 -1

1 Sequence

Length
3678

1 Sequence Ontology Term

Identifier Name Description
transcript