WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:D2013.1 Sequence Name  D2013.1
Length (nt)  690   Chromosome Location  II: 9322068-9322211
Chromosome . Primary Identifier  II Chromosome Location . Start  9322068
Chromosome Location . End  9322211
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
D2013.1

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE30340 RAB-39 26.0 229 Caenorhabditis elegans
 

Other

9 RNAi

WormBase ID
WBRNAi00101873
WBRNAi00101872
WBRNAi00107759
WBRNAi00107758
WBRNAi00043437
WBRNAi00012560
WBRNAi00030377
WBRNAi00091937
WBRNAi00112237

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:D2013.1 9322068 9322211 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004286 rab-39 D2013.1 Caenorhabditis elegans

4 Locations


Feature . Primary Identifier
Start End Strand
CDS:D2013.1 9322068 9322211 -1
CDS:D2013.1 9322261 9322374 -1
CDS:D2013.1 9322425 9322614 -1
CDS:D2013.1 9322668 9322909 -1

1 Sequence

Length
690

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:D2013.1.1 D2013.1.1 911   II: 9321858-9322920