WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:D2013.5.1 Sequence Name  D2013.5.1
Length (nt)  3288   Chromosome Location  II: 9324874-9329665
Chromosome . Primary Identifier  II Chromosome Location . Start  9324874
Chromosome Location . End  9329665 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
D2013.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001134 eat-3 D2013.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:D2013.5 D2013.5 2895   II: 9324888-9325048

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:D2013.5.1 9324874 9329665 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon63325   175   II: 9324874-9325048 Caenorhabditis elegans
Exon63326   142   II: 9325665-9325806 Caenorhabditis elegans
Exon63327   241   II: 9325942-9326182 Caenorhabditis elegans
Exon63328   236   II: 9326560-9326795 Caenorhabditis elegans
Exon63329   533   II: 9326843-9327375 Caenorhabditis elegans
Exon63330   793   II: 9327425-9328217 Caenorhabditis elegans
Exon63331   453   II: 9328262-9328714 Caenorhabditis elegans
Exon63332   268   II: 9328768-9329035 Caenorhabditis elegans
Exon63333   447   II: 9329219-9329665 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:D2013.5.1 9324874 9329665 1

1 Sequence

Length
3288

1 Sequence Ontology Term

Identifier Name Description
transcript