WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F42A8.2.1 Sequence Name  F42A8.2.1
Length (nt)  1053   Chromosome Location  II: 9350714-9352731
Chromosome . Primary Identifier  II Chromosome Location . Start  9350714
Chromosome Location . End  9352731 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F42A8.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006433 sdhb-1 F42A8.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F42A8.2 F42A8.2 897   II: 9350870-9350959

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F42A8.2.1 9350714 9352731 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon63410   246   II: 9350714-9350959 Caenorhabditis elegans
Exon63411   225   II: 9351009-9351233 Caenorhabditis elegans
Exon63412   129   II: 9351406-9351534 Caenorhabditis elegans
Exon63413   234   II: 9351581-9351814 Caenorhabditis elegans
Exon63414   149   II: 9351866-9352014 Caenorhabditis elegans
Exon63415   70   II: 9352662-9352731 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F42A8.2.1 9350714 9352731 -1

1 Sequence

Length
1053

1 Sequence Ontology Term

Identifier Name Description
transcript