WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F42A8.3 Sequence Name  F42A8.3
Length (nt)  969   Chromosome Location  II: 9353000-9353140
Chromosome . Primary Identifier  II Chromosome Location . Start  9353000
Chromosome Location . End  9353140
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F42A8.3

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE35875 CUP-15 37.1 322 Caenorhabditis elegans
 

Other

4 RNAi

WormBase ID
WBRNAi00047072
WBRNAi00014805
WBRNAi00032125
WBRNAi00062241

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F42A8.3 9353000 9353140 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009627 cup-15 F42A8.3 Caenorhabditis elegans

5 Locations


Feature . Primary Identifier
Start End Strand
CDS:F42A8.3 9353000 9353140 1
CDS:F42A8.3 9353188 9353316 1
CDS:F42A8.3 9353383 9353509 1
CDS:F42A8.3 9353553 9353990 1
CDS:F42A8.3 9354039 9354172 1

1 Sequence

Length
969

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F42A8.3.1 F42A8.3.1 1124   II: 9353000-9354327