WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C06C3.1d.1 Sequence Name  C06C3.1d.1
Length (nt)  3355   Chromosome Location  II: 9358531-9369099
Chromosome . Primary Identifier  II Chromosome Location . Start  9358531
Chromosome Location . End  9369099 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C06C3.1d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003196 mel-11 C06C3.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C06C3.1d C06C3.1d 2907   II: 9358534-9358614

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C06C3.1d.1 9358531 9369099 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon63424   84   II: 9358531-9358614 Caenorhabditis elegans
Exon63429   201   II: 9359925-9360125 Caenorhabditis elegans
Exon63433   555   II: 9360690-9361244 Caenorhabditis elegans
Exon63437   218   II: 9361649-9361866 Caenorhabditis elegans
Exon63441   330   II: 9362044-9362373 Caenorhabditis elegans
Exon63445   184   II: 9362968-9363151 Caenorhabditis elegans
Exon63449   137   II: 9363219-9363355 Caenorhabditis elegans
Exon63453   264   II: 9363740-9364003 Caenorhabditis elegans
Exon63458   184   II: 9364893-9365076 Caenorhabditis elegans
Exon63465   201   II: 9365973-9366173 Caenorhabditis elegans
Exon63469   183   II: 9367469-9367651 Caenorhabditis elegans
Exon63473   114   II: 9367695-9367808 Caenorhabditis elegans
Exon63477   168   II: 9367858-9368025 Caenorhabditis elegans
Exon63481   532   II: 9368568-9369099 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C06C3.1d.1 9358531 9369099 1

1 Sequence

Length
3355

1 Sequence Ontology Term

Identifier Name Description
transcript