WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C06C3.1a.1 Sequence Name  C06C3.1a.1
Length (nt)  3496   Chromosome Location  II: 9358533-9369098
Chromosome . Primary Identifier  II Chromosome Location . Start  9358533
Chromosome Location . End  9369098 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C06C3.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003196 mel-11 C06C3.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C06C3.1a C06C3.1a 3051   II: 9358534-9358614

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C06C3.1a.1 9358533 9369098 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon63425   82   II: 9358533-9358614 Caenorhabditis elegans
Exon63426   201   II: 9359925-9360125 Caenorhabditis elegans
Exon63430   555   II: 9360690-9361244 Caenorhabditis elegans
Exon63434   218   II: 9361649-9361866 Caenorhabditis elegans
Exon63438   330   II: 9362044-9362373 Caenorhabditis elegans
Exon63442   184   II: 9362968-9363151 Caenorhabditis elegans
Exon63447   137   II: 9363219-9363355 Caenorhabditis elegans
Exon63450   264   II: 9363740-9364003 Caenorhabditis elegans
Exon63455   184   II: 9364893-9365076 Caenorhabditis elegans
Exon63459   144   II: 9365636-9365779 Caenorhabditis elegans
Exon63462   201   II: 9365973-9366173 Caenorhabditis elegans
Exon63466   183   II: 9367469-9367651 Caenorhabditis elegans
Exon63470   114   II: 9367695-9367808 Caenorhabditis elegans
Exon63474   168   II: 9367858-9368025 Caenorhabditis elegans
Exon63478   531   II: 9368568-9369098 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C06C3.1a.1 9358533 9369098 1

1 Sequence

Length
3496

1 Sequence Ontology Term

Identifier Name Description
transcript