WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C06C3.3.1 Sequence Name  C06C3.3.1
Length (nt)  1957   Chromosome Location  II: 9369074-9372493
Chromosome . Primary Identifier  II Chromosome Location . Start  9369074
Chromosome Location . End  9372493 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C06C3.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007374 C06C3.3 C06C3.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C06C3.3 C06C3.3 1731   II: 9369178-9369386

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C06C3.3.1 9369074 9372493 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon63489   313   II: 9369074-9369386 Caenorhabditis elegans
Exon63490   726   II: 9369439-9370164 Caenorhabditis elegans
Exon63491   271   II: 9370467-9370737 Caenorhabditis elegans
Exon63492   98   II: 9371123-9371220 Caenorhabditis elegans
Exon63493   106   II: 9371298-9371403 Caenorhabditis elegans
Exon63494   99   II: 9371472-9371570 Caenorhabditis elegans
Exon63495   168   II: 9371616-9371783 Caenorhabditis elegans
Exon63496   176   II: 9372318-9372493 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C06C3.3.1 9369074 9372493 -1

1 Sequence

Length
1957

1 Sequence Ontology Term

Identifier Name Description
transcript